The two people I spoke to gave several reasons:

* PCT thru-hikers seldom use Whitney Portal for resupply. Most go from Walker Pass to Kearsarge. It is easier to walk out via Horseshoe Meadows, too.

* Many PCT hikers were paying for the permit thinking they needed it to summit Mt Whitney.

* PCTA felt their hikers shouldn't add to the crowding already on the Whitney Main Trail.

They did not mention any troubling incidents or anything like that.